Index

A

add() (FlexibleArray method), [1] (FlexibleArrayDict method) (FlexibleArrayDictColumnView method) add_alias() (in module vemomoto_core.npcollections.npext) (in module vemomoto_core.npcollections.npextc) add_by_keywords() (FlexibleArray method) add_edge() (FastGraph method) (FlexibleGraph method) add_edge_attributes() (FastGraph method) (FlexibleGraph method) add_fields() (FlexibleArray method), [1] (FlexibleArrayDictColumnView method) (in module vemomoto_core.npcollections.npext) add_names() (in module vemomoto_core.npcollections.npext) (in module vemomoto_core.npcollections.npextc)

add_parent_doc() (in module vemomoto_core.tools.doc_utils) add_tuple() (FlexibleArray method) add_vertex() (FastGraph method) (FlexibleGraph method) add_vertex_attributes() (FastGraph method) (FlexibleGraph method) adjust_indent() (in module vemomoto_core.tools.doc_utils) adjust_ticks() (in module lopaths.test_graph) anderson_darling_NB() (in module hybrid_vector_model.statsutils) anderson_darling_P() (in module hybrid_vector_model.statsutils) anderson_darling_test_discrete() (in module hybrid_vector_model.statsutils) array (FlexibleArray attribute) arrstr() (in module lopaths.test_graph) as_dtype() (in module vemomoto_core.npcollections.npext)

B

BaseTester (class in ci_rvm.test_ci_rvm) BaseTrafficDensityDayTime (class in hybrid_vector_model.traveltime_model) BaseTrafficFactorModel (class in hybrid_vector_model.hybrid_vector_model) benchmark() (in module ci_rvm.test_ci_rvm) benchmark_() (in module ci_rvm.test_ci_rvm) binary_ceil() (in module vemomoto_core.npcollections.npext)

binary_floor() (in module vemomoto_core.npcollections.npext) binsearch() (in module ci_rvm.test_ci_rvm) bisection() (in module ci_rvm.test_ci_rvm) BLOCKSIZE (in module vemomoto_core.tools.saveobject) BOUNDS (BaseTrafficFactorModel attribute) (TrafficFactorModel attribute)

C

changeIndex (FlexibleArray attribute) check_count_distributions_NB() (HybridVectorModel method) ci_rvm.ci_rvm module ci_rvm.test_ci_rvm module CircularParallelCounter (class in vemomoto_core.concurrent.nicepar) compare_distributions() (HybridVectorModel method) compare_travel_time_distributions() (HybridVectorModel method) considered (FlexibleArray attribute) constrained_max() (in module ci_rvm.test_ci_rvm) convert_parameters() (BaseTrafficFactorModel method) (TrafficFactorModel method) convert_R_0_1() (in module vemomoto_core.npcollections.npext) convert_R_0_1_reverse() (in module vemomoto_core.npcollections.npext) convert_R_pos() (in module vemomoto_core.npcollections.npext) convert_R_pos_reverse() (in module vemomoto_core.npcollections.npext) convertPos() (BaseTester method) (in module ci_rvm.test_ci_rvm) convertPos_() (in module ci_rvm.test_ci_rvm) convertPosInv() (BaseTester method) (in module ci_rvm.test_ci_rvm)

convertPosInv_() (in module ci_rvm.test_ci_rvm) Counter (class in vemomoto_core.concurrent.nicepar) CounterFun (class in ci_rvm.ci_rvm) CPU_COUNT (in module hybrid_vector_model.hybrid_vector_model) (in module lopaths.graph) create_budget_plots() (HybridVectorModel method) create_caracteristic_plot() (HybridVectorModel method) create_distribution_plot() (in module hybrid_vector_model.hybrid_vector_model) create_min_paths_graph() (in module lopaths.test_graph) create_min_paths_graph2() (in module lopaths.test_graph) create_observed_predicted_mean_error_plot() (in module hybrid_vector_model.hybrid_vector_model) create_observed_predicted_mean_error_plot_from_files() (in module hybrid_vector_model.hybrid_vector_model) create_plot() (in module ci_rvm.test_ci_rvm) create_quality_plots() (HybridVectorModel method) create_road_network() (HybridVectorModel method) create_route_choice_model() (HybridVectorModel method) create_travel_time_model() (HybridVectorModel method) cropData() (in module hybrid_vector_model.traveltime_model) csr_list_to_csr_matrix() (in module vemomoto_core.npcollections.npext) csr_matrix_nd (class in vemomoto_core.npcollections.npext) cut() (FlexibleArray method), [1]

D

decrease_print_level() (HierarchichalPrinter method) DEFAULT_EXTENSION (in module vemomoto_core.tools.saveobject) DEFAULT_FOLDER_EXTENSION (in module vemomoto_core.tools.saveobject) del_save_separately() (SeparatelySaveable method) DESTINATION_COVARIATES (BaseTrafficFactorModel attribute) (TrafficFactorModel attribute)

DictIterator (class in vemomoto_core.tools.iterext) DocMetaSuperclass (class in vemomoto_core.tools.doc_utils) DummyObj (class in vemomoto_core.concurrent.nicepar) DummyVar (class in vemomoto_core.concurrent.nicepar) DynamicalSystemTester (class in ci_rvm.test_ci_rvm)

E

EmptyList (class in vemomoto_core.tools.iterext) example() (in module hybrid_vector_model.boater_movement_model) exists() (FlexibleArray method), [1] (FlexibleArrayDict method), [1]

expand() (FlexibleArray method), [1] (FlexibleArrayDictColumnView method) extend() (FlexibleArray method), [1] (FlexibleArrayDict method), [1] (FlexibleArrayDictColumnView method)

F

f_constr() (DynamicalSystemTester static method) f_prime() (DynamicalSystemTester static method) FastGraph (class in lopaths.graph) fetch() (MapAsyncResult method) fields_view() (in module vemomoto_core.npcollections.npext) (in module vemomoto_core.npcollections.npextc) find_alternative_paths() (FlowPointGraph method) find_CI() (in module ci_rvm.ci_rvm) find_ci() (in module ci_rvm.ci_rvm) find_CI() (in module ci_rvm.test_ci_rvm) find_CI_bound() (in module ci_rvm.ci_rvm) find_ci_bound() (in module ci_rvm.ci_rvm) find_CIs() (in module ci_rvm.test_ci_rvm) find_function_CI() (in module ci_rvm.ci_rvm) find_function_ci() (in module ci_rvm.ci_rvm) find_locally_optimal_paths() (FlowPointGraph method) find_next_nonzero2d() (in module vemomoto_core.npcollections.npextc) find_potential_routes() (HybridVectorModel method) (TransportNetwork method) find_shortest_distance() (in module lopaths.graph_utils) find_shortest_distance_array() (FlowPointGraph method) find_shortest_distances() (HybridVectorModel method) (TransportNetwork method) find_shortest_path() (FlowPointGraph method) (in module lopaths.graph_utils)

fit() (RouteChoiceModel method) fit_flow_model() (HybridVectorModel method) fit_route_choice_model() (HybridVectorModel method) fitEstimator() (in module hybrid_vector_model.traveltime_model) fitted (RouteChoiceModel property) fixedFun() (in module ci_rvm.test_ci_rvm) FixedOrderedIntDict (class in vemomoto_core.npcollections.FixedOrderedIntDict) FlexibleArray (class in vemomoto_core.npcollections.npext) (class in vemomoto_core.npcollections.npextc) FlexibleArrayDict (class in vemomoto_core.npcollections.npext) (class in vemomoto_core.npcollections.npextc) FlexibleArrayDictColumnView (class in vemomoto_core.npcollections.npext) (class in vemomoto_core.npcollections.npextc) FlexibleArrayIterator (class in vemomoto_core.npcollections.npext) (class in vemomoto_core.npcollections.npextc) FlexibleGraph (class in lopaths.graph) FlexibleSubproblem (class in ci_rvm.ci_rvm) Flipper (class in ci_rvm.ci_rvm) FlowPointGraph (class in lopaths.graph) flush() (Writer method) FormatValToSigFigs() (in module lopaths.sig_fig_rounding) FormatValWithUncRounding() (in module lopaths.sig_fig_rounding) funs (BaseTester property)

G

get() (FlexibleArrayDict method), [1] (intquickheapdict method) get_array() (FlexibleArray method), [1] get_array_indices() (FlexibleArray method), [1] get_chunks() (in module vemomoto_core.npcollections.npext) (in module vemomoto_core.npcollections.npextc) get_common_element2d() (in module vemomoto_core.npcollections.npextc) get_confidence_intervals() (RouteChoiceModel method) get_cpu_chunk_counts() (in module vemomoto_core.concurrent.concurrent_futures_ext) get_edge_count() (FlexibleGraph method) get_edge_data() (FlexibleGraph method) get_funs() (BaseTester method) (DynamicalSystemTester method) (H14Tester method) (LogRegressTester method) get_funs_constr() (DynamicalSystemTester method) get_indent() (in module vemomoto_core.tools.doc_utils) get_indent_multi() (in module vemomoto_core.tools.doc_utils) get_independent_row_indices() (in module ci_rvm.ci_rvm) get_item_count() (FlexibleArrayDict method) get_mean_factor() (BaseTrafficFactorModel method) (TrafficFactorModel method) get_mean_factor_autograd() (BaseTrafficFactorModel method) (TrafficFactorModel method)

get_neighbor_edges() (FlexibleGraph method) get_nLL_funtions() (RouteChoiceModel method) get_normalized_observation_prediction() (HybridVectorModel method) get_origin_destination_indices() (GraphTester method) get_pair_distribution_property() (HybridVectorModel method) get_pair_observation_prediction() (HybridVectorModel method) get_parent_printer() (HierarchichalPrinter method) get_PMF_observation_prediction() (HybridVectorModel method) get_precision_binary_digits() (in module vemomoto_core.npcollections.npext) get_predecessors() (FlexibleGraph method) get_print_level() (HierarchichalPrinter method) get_rss() (DynamicalSystemTester method) get_shared_arrays() (ProcessPoolExecutor method) get_silent_status() (HierarchichalPrinter method) get_station_mean_variance() (HybridVectorModel method) get_station_observation_prediction() (HybridVectorModel method) get_successors() (FlexibleGraph method) get_vertex_count() (FlexibleGraph method) get_vertex_data() (FlexibleGraph method) getColumnView() (FlexibleArrayDict method), [1] getCounter() (in module vemomoto_core.concurrent.nicepar) getitem() (intquickheapdict method) GraphTester (class in lopaths.test_graph) gridsearch() (in module ci_rvm.test_ci_rvm)

H

H14Tester (class in ci_rvm.test_ci_rvm) hasattr() (SeparatelySaveable method) HierarchichalPrinter (class in vemomoto_core.tools.hrprint) HighDimAccessError (csr_matrix_nd attribute) hybrid_vector_model.boater_movement_model module hybrid_vector_model.hybrid_vector_model module

hybrid_vector_model.route_choice_model module hybrid_vector_model.statsutils module hybrid_vector_model.traveltime_model module HybridVectorModel (class in hybrid_vector_model.hybrid_vector_model)

I

IDTYPE (in module hybrid_vector_model.hybrid_vector_model) imultiply() (Sparse3D method) in1d() (in module vemomoto_core.npcollections.npext) in1d2d() (in module vemomoto_core.npcollections.npext) in_sets() (in module lopaths.graph_utils) increase_print_level() (HierarchichalPrinter method) indexDict (FlexibleArrayDict attribute) inherit_doc() (in module vemomoto_core.tools.doc_utils) inherit_print_level() (HierarchichalPrinter method) inherit_silent_status() (HierarchichalPrinter method) interval_probability() (BaseTrafficDensityDayTime method) (TrafficDensityDayTime_PLinear method) (TrafficDensityDayTime_StepFun method) (TrafficDensityVonMises method)

intquickheapdict (class in vemomoto_core.npcollections.intquickheapdict) investigate_profile_likelihood() (HybridVectorModel method) is_contiguous() (FlexibleArray method), [1] is_negative_definite() (in module ci_rvm.ci_rvm) isRecArray (FlexibleArray attribute) isStructured (FlexibleArray attribute) items() (FixedOrderedIntDict method) (intquickheapdict method)

K

key_array (FixedOrderedIntDict attribute)

keys() (FixedOrderedIntDict method)

L

LABELS (BaseTrafficFactorModel attribute) (TrafficFactorModel attribute) list_to_csr_matrix() (in module vemomoto_core.npcollections.npext) load_all() (SeparatelySaveable method) load_object() (in module vemomoto_core.tools.saveobject) Lockable (class in vemomoto_core.concurrent.nicepar) Locked (class in vemomoto_core.concurrent.nicepar) LogRegressTester (class in ci_rvm.test_ci_rvm) lopaths.graph module

lopaths.graph_utils module lopaths.sig_fig_rounding module lopaths.test_graph module lopaths.test_routes module

M

make_contiguous() (FlexibleArray method), [1] make_edges_contiguous() (FastGraph method) map() (ProcessPoolExecutor method) map_async() (MapReduce method) MapAsyncResult (class in vemomoto_core.concurrent.sharedmem_ext) MapReduce (class in vemomoto_core.concurrent.sharedmem_ext) maximize_likelihood() (BaseTrafficDensityDayTime method) (TrafficDensityDayTime_PLinear method) (TrafficDensityDayTime_StepFun method) (TrafficDensityVonMises method) maximize_log_likelihood() (HybridVectorModel method) maximize_log_likelihood_static() (HybridVectorModel static method) mean_relative_absolute_error() (in module hybrid_vector_model.hybrid_vector_model) merge() (in module vemomoto_core.tools.doc_utils) merge_arrays() (in module vemomoto_core.npcollections.npext) mixed_min() (in module ci_rvm.test_ci_rvm) MLE (BaseTester property) module ci_rvm.ci_rvm ci_rvm.test_ci_rvm hybrid_vector_model.boater_movement_model hybrid_vector_model.hybrid_vector_model hybrid_vector_model.route_choice_model hybrid_vector_model.statsutils hybrid_vector_model.traveltime_model lopaths.graph lopaths.graph_utils lopaths.sig_fig_rounding lopaths.test_graph lopaths.test_routes vemomoto_core.concurrent.concurrent_futures_ext vemomoto_core.concurrent.nicepar vemomoto_core.concurrent.sharedmem_ext vemomoto_core.npcollections.FixedOrderedIntDict vemomoto_core.npcollections.intquickheapdict vemomoto_core.npcollections.npext vemomoto_core.npcollections.npextc vemomoto_core.npcollections.sparse3d vemomoto_core.tools.doc_utils vemomoto_core.tools.hrprint vemomoto_core.tools.iterext vemomoto_core.tools.saveobject vemomoto_core.tools.simprofile vemomoto_core.tools.tee

multiply() (Sparse3D method)

N

nbinom_fit() (in module hybrid_vector_model.hybrid_vector_model) neg_log_likelihood() (BaseTrafficDensityDayTime method) (TrafficDensityVonMises method) new() (FixedOrderedIntDict static method) (FlexibleArray static method) (FlexibleArrayDict static method) (FlexibleArrayDictColumnView static method), [1] (GraphTester static method) (HybridVectorModel static method) (RouteTester static method)

next() (CircularParallelCounter method) (Counter method) (ParallelCounter method) NOISEBOUND (RouteChoiceModel attribute)

O

optimize_inspection_station_operation() (HybridVectorModel method)

ORIGIN_COVARIATES (BaseTrafficFactorModel attribute) (TrafficFactorModel attribute)

P

ParallelClass (class in vemomoto_core.concurrent.nicepar) ParallelCounter (class in vemomoto_core.concurrent.nicepar) parmap() (ParallelClass method) pdf() (BaseTrafficDensityDayTime method) (TrafficDensityDayTime_PLinear method) (TrafficDensityDayTime_StepFun method) (TrafficDensityVonMises method) peekitem() (intquickheapdict method) PERMUTATIONS (BaseTrafficFactorModel attribute) (TrafficFactorModel attribute) plot() (BaseTrafficDensityDayTime method) (TrafficDensityDayTime_PLinear method) (TrafficDensityDayTime_StepFun method) (TrafficDensityVonMises method) pointer_prod() (in module vemomoto_core.npcollections.npextc) pointer_sum() (in module vemomoto_core.npcollections.npextc) pointer_sum3D() (in module vemomoto_core.npcollections.npextc) pointer_sum3DX() (in module vemomoto_core.npcollections.npextc) pointer_sum3DY() (in module vemomoto_core.npcollections.npextc)

pointer_sum_chosen() (in module vemomoto_core.npcollections.npextc) pointer_sum_chosen_rows() (in module vemomoto_core.npcollections.npextc) pointer_sum_chosen_rows_fact() (in module vemomoto_core.npcollections.npextc) pointer_sum_row_prod() (in module vemomoto_core.npcollections.npextc) popitem() (intquickheapdict method) postpone_task() (ParallelClass method) prepare_traffic_factor_model() (HybridVectorModel method) prepared (RouteChoiceModel property) preprocess_survey_data() (HybridVectorModel method) preprocessing() (FlowPointGraph method) (GraphTester method) (TransportNetwork method) print_status() (HierarchichalPrinter method) process_sink_covariates() (BaseTrafficFactorModel static method) (TrafficFactorModel static method) process_source_covariates() (BaseTrafficFactorModel static method) ProcessPoolExecutor (class in vemomoto_core.concurrent.concurrent_futures_ext) profile() (in module vemomoto_core.tools.simprofile) prst() (HierarchichalPrinter method)

Q

quick_add() (FlexibleArray method) (FlexibleArrayDict method) (FlexibleArrayDictColumnView method)

quick_add_tuple() (FlexibleArray method) (FlexibleArrayDict method)

R

R2() (in module hybrid_vector_model.statsutils) read_destination_data() (HybridVectorModel method) read_origin_data() (HybridVectorModel method) read_postal_code_area_data() (HybridVectorModel method) read_survey_data() (HybridVectorModel method) readTimeData() (in module hybrid_vector_model.traveltime_model) redraw_predicted_observed() (in module hybrid_vector_model.hybrid_vector_model) remove_edge() (FastGraph method) (FlexibleGraph method) remove_fields() (FlexibleArray method), [1] (FlexibleArrayDictColumnView method) (in module vemomoto_core.npcollections.npext) (in module vemomoto_core.npcollections.npextc)

remove_insignificant_dead_ends() (FlexibleGraph method) remove_vertex() (FastGraph method) (FlexibleGraph method) Repeater (class in vemomoto_core.tools.iterext) reset() (CircularParallelCounter method) (Counter method) (ParallelCounter method) root() (in module ci_rvm.test_ci_rvm) RoundToSigFigs_decim() (in module lopaths.sig_fig_rounding) RoundToSigFigs_fp() (in module lopaths.sig_fig_rounding) RouteChoiceModel (class in hybrid_vector_model.route_choice_model) RouteTester (class in lopaths.test_routes) rss_dyn() (DynamicalSystemTester static method)

S

safe_delattr() (in module hybrid_vector_model.hybrid_vector_model) sample() (TrafficDensityVonMises method) save() (GraphTester method) (HybridVectorModel method) (RouteTester method) save_model_predictions() (HybridVectorModel method) save_object() (in module vemomoto_core.tools.saveobject) (SeparatelySaveable method) save_simulated_observations() (HybridVectorModel method) SeparatelySaveable (class in vemomoto_core.tools.saveobject) set_compliance_rate() (HybridVectorModel method) set_default_edge_data() (FlexibleGraph method) set_default_vertex_data() (FlexibleGraph method) set_edge_data() (FlexibleGraph method) set_fitting_data() (RouteChoiceModel method) set_infested() (HybridVectorModel method) set_origins_considered() (HybridVectorModel method) set_parent_printer() (HierarchichalPrinter method) set_print_level() (HierarchichalPrinter method) set_save_separately() (SeparatelySaveable method) set_silent_status() (HierarchichalPrinter method) set_traffic_factor_model_class() (HybridVectorModel method) set_vertex_data() (FlexibleGraph method) SetDecimalPrecision() (in module lopaths.sig_fig_rounding) setitem() (FlexibleArray method) (FlexibleArrayDict method) (intquickheapdict method) setitem_by_keywords() (FlexibleArray method) (FlexibleArrayDict method) setitem_flexible() (FlexibleArray method) (FlexibleArrayDict method)

shape (FlexibleArray attribute) SharableListArr (class in vemomoto_core.concurrent.nicepar) should_append() (in module vemomoto_core.tools.doc_utils) should_ignore() (in module vemomoto_core.tools.doc_utils) should_insert() (in module vemomoto_core.tools.doc_utils) simulate() (DynamicalSystemTester method) (LogRegressTester method) simulate_() (LogRegressTester method) simulate_count_data() (HybridVectorModel method) SIZE (BaseTrafficFactorModel attribute) size (FlexibleArray attribute) SIZE (TrafficFactorModel attribute) solve() (FlexibleSubproblem method) space (FlexibleArray attribute) Sparse3D (class in vemomoto_core.npcollections.sparse3d) sparsepower() (in module vemomoto_core.npcollections.npext) sparsepowersum() (in module vemomoto_core.npcollections.npext) sparsepowersum2D() (in module vemomoto_core.npcollections.npext) sparseprod() (in module vemomoto_core.npcollections.npext) sparsesum() (in module vemomoto_core.npcollections.npext) sparsesum_chosen() (in module vemomoto_core.npcollections.npext) sparsesum_chosen_rows() (in module vemomoto_core.npcollections.npext) sparsesum_chosen_rows_fact() (in module vemomoto_core.npcollections.npext) sparsesum_row_prod() (in module vemomoto_core.npcollections.npext) split_figure_vertical() (in module lopaths.test_graph) split_variables_numpy() (in module vemomoto_core.tools.doc_utils) staticmethod_inherit_doc() (in module vemomoto_core.tools.doc_utils) strip_lines() (in module vemomoto_core.tools.doc_utils) strip_private() (in module vemomoto_core.tools.doc_utils) sum() (Sparse3D method)

T

Tee (class in vemomoto_core.tools.tee) test1() (in module vemomoto_core.npcollections.sparse3d) test2() (in module vemomoto_core.npcollections.sparse3d) test3() (in module vemomoto_core.npcollections.sparse3d) test_1_1_regression() (HybridVectorModel method) test_dynamical_system() (in module ci_rvm.test_ci_rvm) test_empirical_validity() (RouteTester method) test_find_CI() (in module ci_rvm.test_ci_rvm) test_H14() (in module ci_rvm.test_ci_rvm) test_LogRegress() (in module ci_rvm.test_ci_rvm) test_LogRegress_pred() (in module ci_rvm.test_ci_rvm) test_optimizations() (GraphTester method) test_REVC_approximations() (GraphTester method) test_REVC_LOC() (GraphTester method)

test_REVC_once() (GraphTester method) test_REVC_range() (GraphTester method) test_REVC_range_avg() (GraphTester method) test_REVC_repetition() (GraphTester method) test_REVC_source_sink() (GraphTester method) test_REVC_stretch() (GraphTester method) time_call() (in module lopaths.test_graph) timing() (in module lopaths.test_graph) toarray() (Sparse3D method) TrackFun (class in ci_rvm.test_ci_rvm) TrafficDensityDayTime_PLinear (class in hybrid_vector_model.traveltime_model) TrafficDensityDayTime_StepFun (class in hybrid_vector_model.traveltime_model) TrafficDensityVonMises (class in hybrid_vector_model.traveltime_model) TrafficFactorModel (class in hybrid_vector_model.boater_movement_model) TransportNetwork (class in hybrid_vector_model.hybrid_vector_model)

U

unique_tol() (in module vemomoto_core.npcollections.npextc)

update() (DummyObj method) update_sources_considered() (TransportNetwork method)

V

value_array (FixedOrderedIntDict attribute) values() (FixedOrderedIntDict method) ValueWithUncsRounding() (in module lopaths.sig_fig_rounding) VARIABLE_LABELS (RouteChoiceModel attribute) vemomoto_core.concurrent.concurrent_futures_ext module vemomoto_core.concurrent.nicepar module vemomoto_core.concurrent.sharedmem_ext module vemomoto_core.npcollections.FixedOrderedIntDict module vemomoto_core.npcollections.intquickheapdict module vemomoto_core.npcollections.npext module vemomoto_core.npcollections.npextc module

vemomoto_core.npcollections.sparse3d module vemomoto_core.tools.doc_utils module vemomoto_core.tools.hrprint module vemomoto_core.tools.iterext module vemomoto_core.tools.saveobject module vemomoto_core.tools.simprofile module vemomoto_core.tools.tee module venzon_moolgavkar() (in module ci_rvm.test_ci_rvm) vonmises_logpdf() (in module hybrid_vector_model.statsutils)

W

wald() (in module ci_rvm.test_ci_rvm)

write() (Writer method) Writer (class in vemomoto_core.tools.tee)

Z

zero_truncated_NB() (in module hybrid_vector_model.statsutils)